Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Gm13875-201ENSMUST00000120162 282 ntBASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Gm12208-201ENSMUST00000122004 163 ntBASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Gm27552-201ENSMUST00000183351 62 ntBASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Gm27844-201ENSMUST00000183613 62 ntBASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Gm44775-201ENSMUST00000207266 1456 ntBASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ddx54Q8K4L0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Gm38157-201ENSMUST00000194178 1698 ntBASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ddx54Q8K4L0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Gm13996-201ENSMUST00000118456 430 ntBASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Gm45224-201ENSMUST00000208203 414 ntBASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 AC122876.1-201ENSMUST00000217619 825 ntBASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Spcs1-203ENSMUST00000226374 592 ntBASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ddx54Q8K4L0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms