Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Gm13823-201ENSMUST00000119930 345 ntBASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Gm10060-201ENSMUST00000212002 111 ntBASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Gm15590-201ENSMUST00000078419 552 ntBASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ebf4Q8K4J2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Gm11452-201ENSMUST00000122376 690 ntBASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Mir8098-201ENSMUST00000184011 137 ntBASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Gm17968-201ENSMUST00000194902 784 ntBASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ebf4Q8K4J2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ebf4Q8K4J2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf4Q8K4J2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf4Q8K4J2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf4Q8K4J2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.21□□□□□ -0.46
Ebf4Q8K4J2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf4Q8K4J2 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.21□□□□□ -0.46
Ebf4Q8K4J2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ebf4Q8K4J2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf4Q8K4J2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf4Q8K4J2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.21□□□□□ -0.46
Ebf4Q8K4J2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf4Q8K4J2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf4Q8K4J2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ebf4Q8K4J2 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.21□□□□□ -0.46
Ebf4Q8K4J2 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.2□□□□□ -0.46
Ebf4Q8K4J2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf4Q8K4J2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf4Q8K4J2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf4Q8K4J2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.2□□□□□ -0.46
Ebf4Q8K4J2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf4Q8K4J2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ebf4Q8K4J2 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf4Q8K4J2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.2□□□□□ -0.46
Ebf4Q8K4J2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ebf4Q8K4J2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf4Q8K4J2 Gm6973-201ENSMUST00000117080 721 ntBASIC12.2□□□□□ -0.46
Ebf4Q8K4J2 Gm13884-201ENSMUST00000118103 829 ntBASIC12.2□□□□□ -0.46
Ebf4Q8K4J2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf4Q8K4J2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ebf4Q8K4J2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ebf4Q8K4J2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms