Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm11918-201ENSMUST00000121660 179 ntBASIC15.71■□□□□ 0.11
Usp44Q8C2S0 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp44Q8C2S0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Usp44Q8C2S0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Usp44Q8C2S0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Usp44Q8C2S0 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.71■□□□□ 0.1
Usp44Q8C2S0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Usp44Q8C2S0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Gm14350-201ENSMUST00000116642 640 ntBASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Gm6152-201ENSMUST00000151704 340 ntBASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Gm7287-201ENSMUST00000205267 602 ntBASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Gm18041-201ENSMUST00000218210 618 ntBASIC15.7■□□□□ 0.1
Usp44Q8C2S0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp44Q8C2S0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Usp44Q8C2S0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Gm13612-201ENSMUST00000119276 390 ntBASIC15.68■□□□□ 0.1
Usp44Q8C2S0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Usp44Q8C2S0 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms