Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Gm27437-201ENSMUST00000183429 107 ntBASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Gm2423-201ENSMUST00000074863 733 ntBASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trub1Q8C0D0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Mir6977-201ENSMUST00000184960 64 ntBASIC13.85□□□□□ -0.19
Trub1Q8C0D0 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Gm45841-201ENSMUST00000207700 164 ntBASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trub1Q8C0D0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Gm12341-201ENSMUST00000119724 503 ntBASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Gm42550-201ENSMUST00000201553 960 ntBASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.84□□□□□ -0.19
Trub1Q8C0D0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms