Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp47Q8BY87 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp47Q8BY87 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp47Q8BY87 Gm5896-201ENSMUST00000189662 1024 ntBASIC18.85■□□□□ 0.61
Usp47Q8BY87 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC18.85■□□□□ 0.61
Usp47Q8BY87 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp47Q8BY87 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp47Q8BY87 Gm9899-201ENSMUST00000065519 555 ntBASIC18.85■□□□□ 0.61
Usp47Q8BY87 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp47Q8BY87 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp47Q8BY87 Gm45605-201ENSMUST00000210265 4269 ntBASIC18.85■□□□□ 0.61
Usp47Q8BY87 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp47Q8BY87 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp47Q8BY87 AC101945.2-201ENSMUST00000227886 1377 ntBASIC18.85■□□□□ 0.61
Usp47Q8BY87 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp47Q8BY87 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Usp47Q8BY87 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp47Q8BY87 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp47Q8BY87 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp47Q8BY87 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp47Q8BY87 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp47Q8BY87 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp47Q8BY87 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Gm22018-201ENSMUST00000104357 131 ntBASIC18.84■□□□□ 0.61
Usp47Q8BY87 Gm8805-201ENSMUST00000117848 313 ntBASIC18.84■□□□□ 0.61
Usp47Q8BY87 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Gm44291-201ENSMUST00000203102 2865 ntBASIC18.84■□□□□ 0.61
Usp47Q8BY87 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Usp47Q8BY87 Matn2-206ENSMUST00000228570 2798 ntBASIC18.84■□□□□ 0.61
Usp47Q8BY87 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp47Q8BY87 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC18.83■□□□□ 0.61
Usp47Q8BY87 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC18.83■□□□□ 0.61
Usp47Q8BY87 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp47Q8BY87 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp47Q8BY87 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC18.83■□□□□ 0.61
Usp47Q8BY87 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC18.83■□□□□ 0.61
Usp47Q8BY87 Mir1938-201ENSMUST00000158746 100 ntBASIC18.83■□□□□ 0.61
Usp47Q8BY87 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp47Q8BY87 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Usp47Q8BY87 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp47Q8BY87 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Usp47Q8BY87 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC18.83■□□□□ 0.61
Usp47Q8BY87 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp47Q8BY87 Gm10268-201ENSMUST00000085340 555 ntBASIC18.83■□□□□ 0.61
Usp47Q8BY87 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Usp47Q8BY87 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp47Q8BY87 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp47Q8BY87 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp47Q8BY87 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp47Q8BY87 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Usp47Q8BY87 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Usp47Q8BY87 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp47Q8BY87 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp47Q8BY87 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp47Q8BY87 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp47Q8BY87 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp47Q8BY87 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Usp47Q8BY87 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC18.83■□□□□ 0.6
Usp47Q8BY87 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp47Q8BY87 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp47Q8BY87 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Usp47Q8BY87 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Usp47Q8BY87 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Usp47Q8BY87 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Usp47Q8BY87 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC18.83■□□□□ 0.6
Usp47Q8BY87 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Usp47Q8BY87 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp47Q8BY87 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp47Q8BY87 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp47Q8BY87 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp47Q8BY87 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp47Q8BY87 Gm12742-201ENSMUST00000117326 410 ntBASIC18.82■□□□□ 0.6
Usp47Q8BY87 Gm11637-201ENSMUST00000120601 592 ntBASIC18.82■□□□□ 0.6
Usp47Q8BY87 Gm12363-201ENSMUST00000122250 668 ntBASIC18.82■□□□□ 0.6
Usp47Q8BY87 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC18.82■□□□□ 0.6
Usp47Q8BY87 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp47Q8BY87 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC18.82■□□□□ 0.6
Usp47Q8BY87 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp47Q8BY87 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp47Q8BY87 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Usp47Q8BY87 Gm5370-201ENSMUST00000187187 574 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms