Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Mir7654-201ENSMUST00000185082 70 ntBASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Gm38223-201ENSMUST00000194484 695 ntBASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Gm45841-201ENSMUST00000207700 164 ntBASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Gm18624-201ENSMUST00000220966 658 ntBASIC13.61□□□□□ -0.23
Usp43Q8BUM9 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.61□□□□□ -0.23
Usp43Q8BUM9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.6□□□□□ -0.23
Usp43Q8BUM9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Usp43Q8BUM9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Mir6392-201ENSMUST00000184924 108 ntBASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Usp43Q8BUM9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Usp43Q8BUM9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Usp43Q8BUM9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Usp43Q8BUM9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms