Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Gm11618-201ENSMUST00000117946 267 ntBASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Gm14723-201ENSMUST00000118686 215 ntBASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.22□□□□□ -0.13
Rd3Q8BRE0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
Rd3Q8BRE0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Rd3Q8BRE0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rd3Q8BRE0 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rd3Q8BRE0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Rd3Q8BRE0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Gm14350-201ENSMUST00000116642 640 ntBASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Gm43822-201ENSMUST00000200285 476 ntBASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.2□□□□□ -0.14
Rd3Q8BRE0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rd3Q8BRE0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms