Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cpsf4Q8BQZ5 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Gm28760-201ENSMUST00000185995 736 ntBASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Mir497b-201ENSMUST00000093601 125 ntBASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cpsf4Q8BQZ5 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf4Q8BQZ5 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf4Q8BQZ5 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf4Q8BQZ5 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf4Q8BQZ5 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf4Q8BQZ5 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf4Q8BQZ5 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf4Q8BQZ5 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf4Q8BQZ5 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf4Q8BQZ5 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf4Q8BQZ5 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms