Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco3Q8BQM7 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Gm5864-201ENSMUST00000202263 970 ntBASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Smco3Q8BQM7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Gm9103-201ENSMUST00000119371 405 ntBASIC11.03□□□□□ -0.64
Smco3Q8BQM7 AA543401-201ENSMUST00000164248 1269 ntBASIC11.03□□□□□ -0.64
Smco3Q8BQM7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Gm29741-201ENSMUST00000192667 421 ntBASIC11.03□□□□□ -0.64
Smco3Q8BQM7 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Gm7461-201ENSMUST00000058918 827 ntBASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms