Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm43908-201ENSMUST00000205074 1472 ntBASIC18.74■□□□□ 0.59
Usp54Q8BL06 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp54Q8BL06 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp54Q8BL06 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp54Q8BL06 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp54Q8BL06 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Usp54Q8BL06 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp54Q8BL06 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp54Q8BL06 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp54Q8BL06 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp54Q8BL06 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC18.74■□□□□ 0.59
Usp54Q8BL06 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp54Q8BL06 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC18.73■□□□□ 0.59
Usp54Q8BL06 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Usp54Q8BL06 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Usp54Q8BL06 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC18.73■□□□□ 0.59
Usp54Q8BL06 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC18.73■□□□□ 0.59
Usp54Q8BL06 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp54Q8BL06 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC18.73■□□□□ 0.59
Usp54Q8BL06 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp54Q8BL06 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC18.73■□□□□ 0.59
Usp54Q8BL06 Gm29787-201ENSMUST00000222129 849 ntBASIC18.73■□□□□ 0.59
Usp54Q8BL06 AC165260.3-202ENSMUST00000224550 1031 ntBASIC18.73■□□□□ 0.59
Usp54Q8BL06 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp54Q8BL06 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp54Q8BL06 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp54Q8BL06 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp54Q8BL06 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Usp54Q8BL06 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp54Q8BL06 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp54Q8BL06 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Usp54Q8BL06 Gm14752-201ENSMUST00000120719 2075 ntBASIC18.73■□□□□ 0.59
Usp54Q8BL06 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Usp54Q8BL06 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp54Q8BL06 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC18.73■□□□□ 0.59
Usp54Q8BL06 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp54Q8BL06 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC18.72■□□□□ 0.59
Usp54Q8BL06 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Usp54Q8BL06 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC18.72■□□□□ 0.59
Usp54Q8BL06 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Gm6652-201ENSMUST00000186414 1070 ntBASIC18.72■□□□□ 0.59
Usp54Q8BL06 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Gm14263-201ENSMUST00000117955 746 ntBASIC18.72■□□□□ 0.59
Usp54Q8BL06 Gm12058-201ENSMUST00000118614 437 ntBASIC18.72■□□□□ 0.59
Usp54Q8BL06 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Gm9083-201ENSMUST00000120423 819 ntBASIC18.72■□□□□ 0.59
Usp54Q8BL06 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC18.72■□□□□ 0.59
Usp54Q8BL06 Gm24749-201ENSMUST00000157838 343 ntBASIC18.72■□□□□ 0.59
Usp54Q8BL06 Gm26361-201ENSMUST00000158868 186 ntBASIC18.72■□□□□ 0.59
Usp54Q8BL06 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC18.72■□□□□ 0.59
Usp54Q8BL06 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Usp54Q8BL06 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Gm6992-201ENSMUST00000217973 1607 ntBASIC18.71■□□□□ 0.59
Usp54Q8BL06 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Gm14832-201ENSMUST00000121289 322 ntBASIC18.71■□□□□ 0.59
Usp54Q8BL06 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Usp54Q8BL06 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms