Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Gm15376-201ENSMUST00000122258 783 ntBASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 Gm12091-201ENSMUST00000146791 830 ntBASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 Gm6745-201ENSMUST00000199216 526 ntBASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 Gm44719-201ENSMUST00000206404 149 ntBASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 Gm18307-201ENSMUST00000206864 949 ntBASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srrm4Q8BKA3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Gm12485-201ENSMUST00000119641 291 ntBASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Gm9908-201ENSMUST00000211534 448 ntBASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srrm4Q8BKA3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Srrm4Q8BKA3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Srrm4Q8BKA3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Srrm4Q8BKA3 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.65□□□□□ -0.55
Srrm4Q8BKA3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Srrm4Q8BKA3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Srrm4Q8BKA3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Gm12490-201ENSMUST00000120255 560 ntBASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.64□□□□□ -0.55
Srrm4Q8BKA3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms