Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Gm26315-201ENSMUST00000083890 321 ntBASIC14.29□□□□□ -0.12
Usp1Q8BJQ2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp1Q8BJQ2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp1Q8BJQ2 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.29□□□□□ -0.12
Usp1Q8BJQ2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp1Q8BJQ2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp1Q8BJQ2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp1Q8BJQ2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Usp1Q8BJQ2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp1Q8BJQ2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp1Q8BJQ2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp1Q8BJQ2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp1Q8BJQ2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp1Q8BJQ2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp1Q8BJQ2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp1Q8BJQ2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp1Q8BJQ2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.29□□□□□ -0.12
Usp1Q8BJQ2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp1Q8BJQ2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp1Q8BJQ2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Gm4271-201ENSMUST00000174444 973 ntBASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp1Q8BJQ2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.12
Usp1Q8BJQ2 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp1Q8BJQ2 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.27□□□□□ -0.12
Usp1Q8BJQ2 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp1Q8BJQ2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp1Q8BJQ2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp1Q8BJQ2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp1Q8BJQ2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp1Q8BJQ2 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.27□□□□□ -0.12
Usp1Q8BJQ2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp1Q8BJQ2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp1Q8BJQ2 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.27□□□□□ -0.12
Usp1Q8BJQ2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp1Q8BJQ2 Gm23931-201ENSMUST00000103842 109 ntBASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Gm12203-201ENSMUST00000118235 598 ntBASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Gm12209-201ENSMUST00000120089 596 ntBASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Gm37444-201ENSMUST00000193605 439 ntBASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Gm6013-201ENSMUST00000212264 699 ntBASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp1Q8BJQ2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp1Q8BJQ2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Usp1Q8BJQ2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp1Q8BJQ2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Usp1Q8BJQ2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp1Q8BJQ2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp1Q8BJQ2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp1Q8BJQ2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp1Q8BJQ2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp1Q8BJQ2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Usp1Q8BJQ2 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp1Q8BJQ2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms