Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc40Q8BI79 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Gm13385-201ENSMUST00000121089 220 ntBASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Gm24420-201ENSMUST00000176676 59 ntBASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Gm8927-201ENSMUST00000181978 981 ntBASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Gm3222-201ENSMUST00000071282 990 ntBASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc40Q8BI79 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Gm6912-201ENSMUST00000117218 544 ntBASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Gm27306-201ENSMUST00000183970 107 ntBASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc40Q8BI79 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Gm4875-201ENSMUST00000118257 786 ntBASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Gm15920-201ENSMUST00000118998 402 ntBASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms