Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Gm25144-201ENSMUST00000179561 110 ntBASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Gm25352-201ENSMUST00000179815 110 ntBASIC12.99□□□□□ -0.33
Rnf38Q8BI21 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Gm43703-201ENSMUST00000200523 763 ntBASIC12.99□□□□□ -0.33
Rnf38Q8BI21 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Gm9229-201ENSMUST00000222777 126 ntBASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rnf38Q8BI21 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Gm6912-201ENSMUST00000117218 544 ntBASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Gm15653-201ENSMUST00000119247 907 ntBASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Gm27618-201ENSMUST00000183671 60 ntBASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Gm10766-202ENSMUST00000194123 606 ntBASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rnf38Q8BI21 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.97□□□□□ -0.33
Rnf38Q8BI21 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Gm15678-201ENSMUST00000117573 960 ntBASIC12.97□□□□□ -0.33
Rnf38Q8BI21 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Mir6956-201ENSMUST00000183598 62 ntBASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.97□□□□□ -0.33
Rnf38Q8BI21 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms