Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Gm6912-201ENSMUST00000117218 544 ntBASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Gm43433-201ENSMUST00000196573 481 ntBASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Depdc1bQ8BH88 Grk6-205ENSMUST00000224653 2976 ntBASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Gm14127-201ENSMUST00000117906 678 ntBASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Mir6392-201ENSMUST00000184924 108 ntBASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Depdc1bQ8BH88 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Gm12138-201ENSMUST00000122180 951 ntBASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Gm5354-201ENSMUST00000182417 973 ntBASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Depdc1bQ8BH88 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Depdc1bQ8BH88 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms