Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Mir497b-201ENSMUST00000093601 125 ntBASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Trim6Q8BGE7 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim6Q8BGE7 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim6Q8BGE7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim6Q8BGE7 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim6Q8BGE7 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim6Q8BGE7 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim6Q8BGE7 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim6Q8BGE7 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim6Q8BGE7 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim6Q8BGE7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim6Q8BGE7 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim6Q8BGE7 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.27□□□□□ -0.12
Trim6Q8BGE7 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim6Q8BGE7 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.27□□□□□ -0.12
Trim6Q8BGE7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim6Q8BGE7 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Mir6990-201ENSMUST00000183724 91 ntBASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Gm43125-201ENSMUST00000201724 730 ntBASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim6Q8BGE7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Gm25911-201ENSMUST00000157621 56 ntBASIC14.26□□□□□ -0.13
Trim6Q8BGE7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Gm16476-201ENSMUST00000221544 139 ntBASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim6Q8BGE7 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim6Q8BGE7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim6Q8BGE7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim6Q8BGE7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim6Q8BGE7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim6Q8BGE7 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim6Q8BGE7 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim6Q8BGE7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim6Q8BGE7 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim6Q8BGE7 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim6Q8BGE7 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.25□□□□□ -0.13
Trim6Q8BGE7 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim6Q8BGE7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim6Q8BGE7 Gm8000-201ENSMUST00000188378 592 ntBASIC14.25□□□□□ -0.13
Trim6Q8BGE7 Gm29541-201ENSMUST00000191351 678 ntBASIC14.25□□□□□ -0.13
Trim6Q8BGE7 Gm33320-201ENSMUST00000192232 530 ntBASIC14.25□□□□□ -0.13
Trim6Q8BGE7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Trim6Q8BGE7 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms