Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox21Q811W0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.01□□□□□ -0.65
Sox21Q811W0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Mir1894-201ENSMUST00000122802 81 ntBASIC11.01□□□□□ -0.65
Sox21Q811W0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.01□□□□□ -0.65
Sox21Q811W0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Sox21Q811W0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.01□□□□□ -0.65
Sox21Q811W0 Gm24420-201ENSMUST00000176676 59 ntBASIC11.01□□□□□ -0.65
Sox21Q811W0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox21Q811W0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox21Q811W0 Gm29741-201ENSMUST00000192667 421 ntBASIC11.01□□□□□ -0.65
Sox21Q811W0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Sox21Q811W0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.01□□□□□ -0.65
Sox21Q811W0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.01□□□□□ -0.65
Sox21Q811W0 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Sox21Q811W0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox21Q811W0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Sox21Q811W0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox21Q811W0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Sox21Q811W0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sox21Q811W0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sox21Q811W0 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11□□□□□ -0.65
Sox21Q811W0 Gm43630-201ENSMUST00000201550 776 ntBASIC11□□□□□ -0.65
Sox21Q811W0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11□□□□□ -0.65
Sox21Q811W0 Gm4971-201ENSMUST00000205991 1108 ntBASIC11□□□□□ -0.65
Sox21Q811W0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11□□□□□ -0.65
Sox21Q811W0 AC140451.2-201ENSMUST00000228030 664 ntBASIC11□□□□□ -0.65
Sox21Q811W0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11□□□□□ -0.65
Sox21Q811W0 Gm12500-202ENSMUST00000186471 2428 ntBASIC11□□□□□ -0.65
Sox21Q811W0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Sox21Q811W0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sox21Q811W0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Sox21Q811W0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Sox21Q811W0 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox21Q811W0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.99□□□□□ -0.65
Sox21Q811W0 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox21Q811W0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox21Q811W0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox21Q811W0 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox21Q811W0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox21Q811W0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.99□□□□□ -0.65
Sox21Q811W0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox21Q811W0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox21Q811W0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox21Q811W0 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox21Q811W0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox21Q811W0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.99□□□□□ -0.65
Sox21Q811W0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox21Q811W0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox21Q811W0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox21Q811W0 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox21Q811W0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Sox21Q811W0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sox21Q811W0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms