Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ubp1Q811S7 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Ubp1Q811S7 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ubp1Q811S7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ubp1Q811S7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ubp1Q811S7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ubp1Q811S7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ubp1Q811S7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ubp1Q811S7 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.27□□□□□ -0.29
Ubp1Q811S7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ubp1Q811S7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.27□□□□□ -0.29
Ubp1Q811S7 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Gm6180-201ENSMUST00000065243 498 ntBASIC13.27□□□□□ -0.29
Ubp1Q811S7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.27□□□□□ -0.29
Ubp1Q811S7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.27□□□□□ -0.29
Ubp1Q811S7 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ubp1Q811S7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.26□□□□□ -0.29
Ubp1Q811S7 Gm6745-201ENSMUST00000199216 526 ntBASIC13.26□□□□□ -0.29
Ubp1Q811S7 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Gm9908-201ENSMUST00000211534 448 ntBASIC13.26□□□□□ -0.29
Ubp1Q811S7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Gm5161-201ENSMUST00000075243 853 ntBASIC13.26□□□□□ -0.29
Ubp1Q811S7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Gm10652-201ENSMUST00000199790 2622 ntBASIC13.26□□□□□ -0.29
Ubp1Q811S7 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Ubp1Q811S7 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ubp1Q811S7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Gm13689-201ENSMUST00000119360 685 ntBASIC13.25□□□□□ -0.29
Ubp1Q811S7 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ubp1Q811S7 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Gm8515-201ENSMUST00000194852 576 ntBASIC13.25□□□□□ -0.29
Ubp1Q811S7 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms