Protein–RNA interactions for Protein: Q810U5

Ccdc50, Coiled-coil domain-containing protein 50, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50Q810U5 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc50Q810U5 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc50Q810U5 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc50Q810U5 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ccdc50Q810U5 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc50Q810U5 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc50Q810U5 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.3□□□□□ -0.28
Ccdc50Q810U5 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc50Q810U5 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc50Q810U5 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc50Q810U5 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc50Q810U5 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc50Q810U5 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Gm10154-201ENSMUST00000084445 354 ntBASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc50Q810U5 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc50Q810U5 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc50Q810U5 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ccdc50Q810U5 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc50Q810U5 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.28
Ccdc50Q810U5 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.27□□□□□ -0.28
Ccdc50Q810U5 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc50Q810U5 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc50Q810U5 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc50Q810U5 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc50Q810U5 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc50Q810U5 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc50Q810U5 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.27□□□□□ -0.29
Ccdc50Q810U5 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.27□□□□□ -0.29
Ccdc50Q810U5 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.27□□□□□ -0.29
Ccdc50Q810U5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.27□□□□□ -0.29
Ccdc50Q810U5 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms