Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim50Q810I2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim50Q810I2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim50Q810I2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim50Q810I2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim50Q810I2 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim50Q810I2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim50Q810I2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim50Q810I2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.09□□□□□ -0.31
Trim50Q810I2 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.09□□□□□ -0.31
Trim50Q810I2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trim50Q810I2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim50Q810I2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trim50Q810I2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.09□□□□□ -0.31
Trim50Q810I2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Trim50Q810I2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim50Q810I2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim50Q810I2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim50Q810I2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim50Q810I2 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.08□□□□□ -0.31
Trim50Q810I2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim50Q810I2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim50Q810I2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.08□□□□□ -0.32
Trim50Q810I2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.08□□□□□ -0.32
Trim50Q810I2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Trim50Q810I2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.08□□□□□ -0.32
Trim50Q810I2 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.08□□□□□ -0.32
Trim50Q810I2 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.08□□□□□ -0.32
Trim50Q810I2 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.08□□□□□ -0.32
Trim50Q810I2 Gm12403-201ENSMUST00000121384 959 ntBASIC13.08□□□□□ -0.32
Trim50Q810I2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.08□□□□□ -0.32
Trim50Q810I2 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.08□□□□□ -0.32
Trim50Q810I2 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.08□□□□□ -0.32
Trim50Q810I2 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.08□□□□□ -0.32
Trim50Q810I2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.08□□□□□ -0.32
Trim50Q810I2 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.08□□□□□ -0.32
Trim50Q810I2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.08□□□□□ -0.32
Trim50Q810I2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim50Q810I2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim50Q810I2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim50Q810I2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim50Q810I2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim50Q810I2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim50Q810I2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
Trim50Q810I2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim50Q810I2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim50Q810I2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim50Q810I2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim50Q810I2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim50Q810I2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms