Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf38bQ80SY5 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Gm27501-201ENSMUST00000183599 107 ntBASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Gm42627-201ENSMUST00000197347 224 ntBASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf38bQ80SY5 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf38bQ80SY5 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf38bQ80SY5 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
Prpf38bQ80SY5 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Prpf38bQ80SY5 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Prpf38bQ80SY5 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Gm22902-201ENSMUST00000158488 302 ntBASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Gm38002-201ENSMUST00000193255 180 ntBASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Gm37744-201ENSMUST00000194616 1590 ntBASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.08□□□□□ -0.16
Prpf38bQ80SY5 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Gm43758-201ENSMUST00000199500 367 ntBASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms