Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.31□□□□□ -0.6
Rif1Q6PR54 Gm42518-201ENSMUST00000196277 938 ntBASIC11.31□□□□□ -0.6
Rif1Q6PR54 Gm8365-201ENSMUST00000197334 648 ntBASIC11.31□□□□□ -0.6
Rif1Q6PR54 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.31□□□□□ -0.6
Rif1Q6PR54 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.31□□□□□ -0.6
Rif1Q6PR54 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Gm45244-201ENSMUST00000211328 2200 ntBASIC11.31□□□□□ -0.6
Rif1Q6PR54 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rif1Q6PR54 Gm11354-201ENSMUST00000121974 422 ntBASIC11.3□□□□□ -0.6
Rif1Q6PR54 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.3□□□□□ -0.6
Rif1Q6PR54 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
Rif1Q6PR54 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.3□□□□□ -0.6
Rif1Q6PR54 Gm8913-201ENSMUST00000209491 641 ntBASIC11.3□□□□□ -0.6
Rif1Q6PR54 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rif1Q6PR54 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.3□□□□□ -0.6
Rif1Q6PR54 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rif1Q6PR54 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Gm12628-201ENSMUST00000122193 382 ntBASIC11.29□□□□□ -0.6
Rif1Q6PR54 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Gm24749-201ENSMUST00000157838 343 ntBASIC11.29□□□□□ -0.6
Rif1Q6PR54 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.29□□□□□ -0.6
Rif1Q6PR54 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rif1Q6PR54 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.29□□□□□ -0.6
Rif1Q6PR54 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.29□□□□□ -0.6
Rif1Q6PR54 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.29□□□□□ -0.6
Rif1Q6PR54 Gm5298-201ENSMUST00000201122 892 ntBASIC11.29□□□□□ -0.6
Rif1Q6PR54 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms