Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.3□□□□□ -0.12
CtifQ6PEE2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.29□□□□□ -0.12
CtifQ6PEE2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.29□□□□□ -0.12
CtifQ6PEE2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.29□□□□□ -0.12
CtifQ6PEE2 Gm15483-201ENSMUST00000120338 456 ntBASIC14.29□□□□□ -0.12
CtifQ6PEE2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CtifQ6PEE2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtifQ6PEE2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.28□□□□□ -0.12
CtifQ6PEE2 Gm44124-201ENSMUST00000204159 472 ntBASIC14.28□□□□□ -0.12
CtifQ6PEE2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.28□□□□□ -0.12
CtifQ6PEE2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CtifQ6PEE2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CtifQ6PEE2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CtifQ6PEE2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.12
CtifQ6PEE2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CtifQ6PEE2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CtifQ6PEE2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.27□□□□□ -0.12
CtifQ6PEE2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CtifQ6PEE2 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CtifQ6PEE2 Gm25990-201ENSMUST00000102440 86 ntBASIC14.27□□□□□ -0.13
CtifQ6PEE2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CtifQ6PEE2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.27□□□□□ -0.13
CtifQ6PEE2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CtifQ6PEE2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.27□□□□□ -0.13
CtifQ6PEE2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CtifQ6PEE2 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.27□□□□□ -0.13
CtifQ6PEE2 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtifQ6PEE2 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtifQ6PEE2 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtifQ6PEE2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.27□□□□□ -0.13
CtifQ6PEE2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CtifQ6PEE2 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtifQ6PEE2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtifQ6PEE2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtifQ6PEE2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms