Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Gm5312-201ENSMUST00000203728 547 ntBASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.34□□□□□ -0.43
Smarcd3Q6P9Z1 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.43
Smarcd3Q6P9Z1 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Smarcd3Q6P9Z1 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Smarcd3Q6P9Z1 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.33□□□□□ -0.43
Smarcd3Q6P9Z1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Smarcd3Q6P9Z1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Gm15393-201ENSMUST00000120499 219 ntBASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Gm13385-201ENSMUST00000121089 220 ntBASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Gm27533-201ENSMUST00000183800 152 ntBASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Gm46209-201ENSMUST00000217912 553 ntBASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Smarcd3Q6P9Z1 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Gm25144-201ENSMUST00000179561 110 ntBASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Gm25352-201ENSMUST00000179815 110 ntBASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Smarcd3Q6P9Z1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms