Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sdc3Q64519 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sdc3Q64519 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.95□□□□□ -0.34
Sdc3Q64519 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Sdc3Q64519 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.94□□□□□ -0.34
Sdc3Q64519 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sdc3Q64519 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Sdc3Q64519 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sdc3Q64519 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.94□□□□□ -0.34
Sdc3Q64519 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sdc3Q64519 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Sdc3Q64519 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sdc3Q64519 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.94□□□□□ -0.34
Sdc3Q64519 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.94□□□□□ -0.34
Sdc3Q64519 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sdc3Q64519 Gm27772-201ENSMUST00000184900 187 ntBASIC12.94□□□□□ -0.34
Sdc3Q64519 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.94□□□□□ -0.34
Sdc3Q64519 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.94□□□□□ -0.34
Sdc3Q64519 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sdc3Q64519 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.94□□□□□ -0.34
Sdc3Q64519 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sdc3Q64519 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sdc3Q64519 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Sdc3Q64519 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sdc3Q64519 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.93□□□□□ -0.34
Sdc3Q64519 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.93□□□□□ -0.34
Sdc3Q64519 Gm15429-201ENSMUST00000151268 798 ntBASIC12.93□□□□□ -0.34
Sdc3Q64519 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Sdc3Q64519 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Gm2445-201ENSMUST00000182798 989 ntBASIC12.93□□□□□ -0.34
Sdc3Q64519 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.93□□□□□ -0.34
Sdc3Q64519 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.93□□□□□ -0.34
Sdc3Q64519 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Sdc3Q64519 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Sdc3Q64519 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sdc3Q64519 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sdc3Q64519 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.93□□□□□ -0.34
Sdc3Q64519 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms