Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.29□□□□□ -0.44
VcanQ62059 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
VcanQ62059 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
VcanQ62059 Gm11980-201ENSMUST00000121445 986 ntBASIC12.29□□□□□ -0.44
VcanQ62059 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Gm17812-201ENSMUST00000204935 318 ntBASIC12.29□□□□□ -0.44
VcanQ62059 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
VcanQ62059 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
VcanQ62059 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
VcanQ62059 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.29□□□□□ -0.44
VcanQ62059 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.29□□□□□ -0.44
VcanQ62059 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.29□□□□□ -0.44
VcanQ62059 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.29□□□□□ -0.44
VcanQ62059 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.29□□□□□ -0.44
VcanQ62059 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Gm11450-201ENSMUST00000121144 333 ntBASIC12.29□□□□□ -0.44
VcanQ62059 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Gm9111-201ENSMUST00000219394 709 ntBASIC12.29□□□□□ -0.44
VcanQ62059 Gm14005-208ENSMUST00000223654 681 ntBASIC12.29□□□□□ -0.44
VcanQ62059 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.29□□□□□ -0.44
VcanQ62059 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.29□□□□□ -0.44
VcanQ62059 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
VcanQ62059 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
VcanQ62059 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.28□□□□□ -0.44
VcanQ62059 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.28□□□□□ -0.44
VcanQ62059 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
VcanQ62059 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcanQ62059 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcanQ62059 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcanQ62059 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcanQ62059 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.28□□□□□ -0.44
VcanQ62059 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
VcanQ62059 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VcanQ62059 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcanQ62059 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VcanQ62059 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcanQ62059 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcanQ62059 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VcanQ62059 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.28□□□□□ -0.44
VcanQ62059 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcanQ62059 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
VcanQ62059 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
VcanQ62059 Gm26185-201ENSMUST00000157692 266 ntBASIC12.28□□□□□ -0.44
VcanQ62059 Gm17208-201ENSMUST00000168388 535 ntBASIC12.28□□□□□ -0.44
VcanQ62059 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.28□□□□□ -0.44
VcanQ62059 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcanQ62059 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcanQ62059 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VcanQ62059 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcanQ62059 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcanQ62059 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VcanQ62059 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VcanQ62059 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.27□□□□□ -0.44
VcanQ62059 Gm23251-201ENSMUST00000103773 110 ntBASIC12.27□□□□□ -0.44
VcanQ62059 Gm12628-201ENSMUST00000122193 382 ntBASIC12.27□□□□□ -0.44
VcanQ62059 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
VcanQ62059 Gm25072-201ENSMUST00000175233 235 ntBASIC12.27□□□□□ -0.44
VcanQ62059 Gm43752-201ENSMUST00000198475 697 ntBASIC12.27□□□□□ -0.44
VcanQ62059 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VcanQ62059 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VcanQ62059 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VcanQ62059 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
VcanQ62059 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VcanQ62059 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
VcanQ62059 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
VcanQ62059 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
VcanQ62059 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
VcanQ62059 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VcanQ62059 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
VcanQ62059 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.27□□□□□ -0.45
VcanQ62059 Gm15547-201ENSMUST00000122152 333 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms