Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 Gm11425-201ENSMUST00000119608 498 ntBASIC15.83■□□□□ 0.12
Ctr9Q62018 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.83■□□□□ 0.12
Ctr9Q62018 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.83■□□□□ 0.12
Ctr9Q62018 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.83■□□□□ 0.12
Ctr9Q62018 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.83■□□□□ 0.12
Ctr9Q62018 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.83■□□□□ 0.12
Ctr9Q62018 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.83■□□□□ 0.12
Ctr9Q62018 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ctr9Q62018 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.83■□□□□ 0.12
Ctr9Q62018 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.83■□□□□ 0.12
Ctr9Q62018 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 Gm9396-201ENSMUST00000076703 567 ntBASIC15.83■□□□□ 0.12
Ctr9Q62018 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.83■□□□□ 0.12
Ctr9Q62018 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.83■□□□□ 0.12
Ctr9Q62018 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ctr9Q62018 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ctr9Q62018 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctr9Q62018 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ctr9Q62018 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctr9Q62018 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctr9Q62018 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctr9Q62018 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Ctr9Q62018 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctr9Q62018 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctr9Q62018 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ctr9Q62018 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctr9Q62018 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctr9Q62018 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.82■□□□□ 0.12
Ctr9Q62018 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctr9Q62018 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ctr9Q62018 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.82■□□□□ 0.12
Ctr9Q62018 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctr9Q62018 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctr9Q62018 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ctr9Q62018 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctr9Q62018 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ctr9Q62018 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctr9Q62018 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctr9Q62018 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctr9Q62018 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ctr9Q62018 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctr9Q62018 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ctr9Q62018 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ctr9Q62018 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ctr9Q62018 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ctr9Q62018 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ctr9Q62018 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ctr9Q62018 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ctr9Q62018 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ctr9Q62018 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.81■□□□□ 0.12
Ctr9Q62018 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.81■□□□□ 0.12
Ctr9Q62018 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.81■□□□□ 0.12
Ctr9Q62018 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ctr9Q62018 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Ctr9Q62018 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ctr9Q62018 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ctr9Q62018 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ctr9Q62018 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ctr9Q62018 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.81■□□□□ 0.12
Ctr9Q62018 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.81■□□□□ 0.12
Ctr9Q62018 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.81■□□□□ 0.12
Ctr9Q62018 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.81■□□□□ 0.12
Ctr9Q62018 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ctr9Q62018 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ctr9Q62018 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.81■□□□□ 0.12
Ctr9Q62018 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ctr9Q62018 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ctr9Q62018 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ctr9Q62018 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Ctr9Q62018 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.8■□□□□ 0.12
Ctr9Q62018 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ctr9Q62018 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ctr9Q62018 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ctr9Q62018 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ctr9Q62018 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ctr9Q62018 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ctr9Q62018 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ctr9Q62018 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ctr9Q62018 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ctr9Q62018 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ctr9Q62018 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ctr9Q62018 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ctr9Q62018 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms