Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sox17Q61473 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.58□□□□□ -0.4
Sox17Q61473 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sox17Q61473 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Gm6916-202ENSMUST00000205523 195 ntBASIC12.58□□□□□ -0.4
Sox17Q61473 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox17Q61473 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.58□□□□□ -0.4
Sox17Q61473 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sox17Q61473 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox17Q61473 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.58□□□□□ -0.4
Sox17Q61473 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sox17Q61473 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Sox17Q61473 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sox17Q61473 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox17Q61473 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox17Q61473 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.57□□□□□ -0.4
Sox17Q61473 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox17Q61473 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sox17Q61473 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sox17Q61473 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sox17Q61473 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sox17Q61473 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Mir3113-201ENSMUST00000175478 76 ntBASIC12.57□□□□□ -0.4
Sox17Q61473 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.57□□□□□ -0.4
Sox17Q61473 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.57□□□□□ -0.4
Sox17Q61473 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sox17Q61473 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.57□□□□□ -0.4
Sox17Q61473 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sox17Q61473 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox17Q61473 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.56□□□□□ -0.4
Sox17Q61473 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.56□□□□□ -0.4
Sox17Q61473 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.56□□□□□ -0.4
Sox17Q61473 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox17Q61473 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.56□□□□□ -0.4
Sox17Q61473 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.56□□□□□ -0.4
Sox17Q61473 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Sox17Q61473 Gm17271-201ENSMUST00000165535 355 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms