Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.94□□□□□ -0.34
Col12a1Q60847 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col12a1Q60847 Gm8894-201ENSMUST00000074642 666 ntBASIC12.94□□□□□ -0.34
Col12a1Q60847 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col12a1Q60847 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col12a1Q60847 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col12a1Q60847 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.94□□□□□ -0.34
Col12a1Q60847 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col12a1Q60847 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col12a1Q60847 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col12a1Q60847 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col12a1Q60847 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col12a1Q60847 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.94□□□□□ -0.34
Col12a1Q60847 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Col12a1Q60847 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.94□□□□□ -0.34
Col12a1Q60847 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Col12a1Q60847 Gm21811-201ENSMUST00000096485 930 ntBASIC12.94□□□□□ -0.34
Col12a1Q60847 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Col12a1Q60847 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col12a1Q60847 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col12a1Q60847 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col12a1Q60847 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col12a1Q60847 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Col12a1Q60847 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.93□□□□□ -0.34
Col12a1Q60847 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm2445-201ENSMUST00000182798 989 ntBASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm29615-201ENSMUST00000185371 697 ntBASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm28224-201ENSMUST00000186078 697 ntBASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm29001-201ENSMUST00000186177 697 ntBASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm28292-201ENSMUST00000186593 697 ntBASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm28101-201ENSMUST00000187608 697 ntBASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm29076-201ENSMUST00000187689 697 ntBASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm28302-201ENSMUST00000187931 697 ntBASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm28646-201ENSMUST00000188220 697 ntBASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm28205-201ENSMUST00000189177 697 ntBASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm29032-201ENSMUST00000189797 697 ntBASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm28695-201ENSMUST00000190300 697 ntBASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm37448-201ENSMUST00000192795 697 ntBASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm45550-201ENSMUST00000209380 946 ntBASIC12.93□□□□□ -0.34
Col12a1Q60847 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.93□□□□□ -0.34
Col12a1Q60847 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Col12a1Q60847 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.93□□□□□ -0.34
Col12a1Q60847 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Col12a1Q60847 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.93□□□□□ -0.34
Col12a1Q60847 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Col12a1Q60847 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.93□□□□□ -0.34
Col12a1Q60847 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col12a1Q60847 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.92□□□□□ -0.34
Col12a1Q60847 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col12a1Q60847 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col12a1Q60847 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col12a1Q60847 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col12a1Q60847 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col12a1Q60847 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col12a1Q60847 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.92□□□□□ -0.34
Col12a1Q60847 Gm23251-201ENSMUST00000103773 110 ntBASIC12.92□□□□□ -0.34
Col12a1Q60847 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.92□□□□□ -0.34
Col12a1Q60847 Gm22138-201ENSMUST00000158748 128 ntBASIC12.92□□□□□ -0.34
Col12a1Q60847 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col12a1Q60847 Gm37028-201ENSMUST00000194276 107 ntBASIC12.92□□□□□ -0.34
Col12a1Q60847 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col12a1Q60847 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col12a1Q60847 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.92□□□□□ -0.34
Col12a1Q60847 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col12a1Q60847 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col12a1Q60847 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col12a1Q60847 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col12a1Q60847 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col12a1Q60847 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col12a1Q60847 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col12a1Q60847 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col12a1Q60847 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.92□□□□□ -0.34
Col12a1Q60847 Gm37201-201ENSMUST00000191845 523 ntBASIC12.92□□□□□ -0.34
Col12a1Q60847 Gm32999-201ENSMUST00000192693 562 ntBASIC12.92□□□□□ -0.34
Col12a1Q60847 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col12a1Q60847 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms