Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav5d-4Q5R1F6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Gm21854-201ENSMUST00000179901 471 ntBASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Mir7023-201ENSMUST00000185093 64 ntBASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Gm9797-201ENSMUST00000052902 613 ntBASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav5d-4Q5R1F6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Gm14719-201ENSMUST00000121891 340 ntBASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav5d-4Q5R1F6 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms