Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Syne3Q4FZC9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.27□□□□□ -0.12
Syne3Q4FZC9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syne3Q4FZC9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syne3Q4FZC9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syne3Q4FZC9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Syne3Q4FZC9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Syne3Q4FZC9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Syne3Q4FZC9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne3Q4FZC9 Gm22189-201ENSMUST00000103822 86 ntBASIC14.27□□□□□ -0.13
Syne3Q4FZC9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.27□□□□□ -0.13
Syne3Q4FZC9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Syne3Q4FZC9 Gm15240-201ENSMUST00000118156 720 ntBASIC14.27□□□□□ -0.13
Syne3Q4FZC9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.27□□□□□ -0.13
Syne3Q4FZC9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.27□□□□□ -0.13
Syne3Q4FZC9 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.27□□□□□ -0.13
Syne3Q4FZC9 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Syne3Q4FZC9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne3Q4FZC9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne3Q4FZC9 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne3Q4FZC9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne3Q4FZC9 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne3Q4FZC9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne3Q4FZC9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne3Q4FZC9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne3Q4FZC9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Syne3Q4FZC9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne3Q4FZC9 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne3Q4FZC9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Gm19220-201ENSMUST00000222682 803 ntBASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne3Q4FZC9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne3Q4FZC9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne3Q4FZC9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne3Q4FZC9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Syne3Q4FZC9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne3Q4FZC9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne3Q4FZC9 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.25□□□□□ -0.13
Syne3Q4FZC9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Syne3Q4FZC9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne3Q4FZC9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.25□□□□□ -0.13
Syne3Q4FZC9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne3Q4FZC9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne3Q4FZC9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne3Q4FZC9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.25□□□□□ -0.13
Syne3Q4FZC9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.25□□□□□ -0.13
Syne3Q4FZC9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Syne3Q4FZC9 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.25□□□□□ -0.13
Syne3Q4FZC9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms