Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Tmem40Q4FJU9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tmem40Q4FJU9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Tmem40Q4FJU9 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tmem40Q4FJU9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Tmem40Q4FJU9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tmem40Q4FJU9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tmem40Q4FJU9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tmem40Q4FJU9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.53□□□□□ -0.56
Tmem40Q4FJU9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tmem40Q4FJU9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tmem40Q4FJU9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tmem40Q4FJU9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tmem40Q4FJU9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Tmem40Q4FJU9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tmem40Q4FJU9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Tmem40Q4FJU9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tmem40Q4FJU9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tmem40Q4FJU9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tmem40Q4FJU9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tmem40Q4FJU9 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Tmem40Q4FJU9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Tmem40Q4FJU9 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Gm29649-201ENSMUST00000185649 419 ntBASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 CT025552.1-201ENSMUST00000224561 521 ntBASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 AC154806.5-202ENSMUST00000227217 1443 ntBASIC11.52□□□□□ -0.57
Tmem40Q4FJU9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Gm15198-201ENSMUST00000117283 177 ntBASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Gm21139-201ENSMUST00000186594 877 ntBASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.51□□□□□ -0.57
Tmem40Q4FJU9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms