Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm27989-201ENSMUST00000184721 107 ntBASIC13.92□□□□□ -0.18
Trim80Q3V061 Gm18049-201ENSMUST00000208909 581 ntBASIC13.92□□□□□ -0.18
Trim80Q3V061 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim80Q3V061 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim80Q3V061 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
Trim80Q3V061 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trim80Q3V061 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim80Q3V061 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim80Q3V061 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim80Q3V061 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim80Q3V061 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.91□□□□□ -0.18
Trim80Q3V061 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
Trim80Q3V061 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim80Q3V061 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim80Q3V061 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim80Q3V061 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim80Q3V061 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim80Q3V061 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim80Q3V061 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim80Q3V061 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim80Q3V061 Gm8410-201ENSMUST00000117225 605 ntBASIC13.91□□□□□ -0.18
Trim80Q3V061 Gm5479-201ENSMUST00000160578 435 ntBASIC13.91□□□□□ -0.18
Trim80Q3V061 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim80Q3V061 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim80Q3V061 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim80Q3V061 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim80Q3V061 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim80Q3V061 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim80Q3V061 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim80Q3V061 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim80Q3V061 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim80Q3V061 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim80Q3V061 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim80Q3V061 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim80Q3V061 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim80Q3V061 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim80Q3V061 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.9□□□□□ -0.18
Trim80Q3V061 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.9□□□□□ -0.18
Trim80Q3V061 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim80Q3V061 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim80Q3V061 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Trim80Q3V061 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim80Q3V061 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim80Q3V061 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim80Q3V061 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim80Q3V061 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trim80Q3V061 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.9□□□□□ -0.18
Trim80Q3V061 Gm13823-201ENSMUST00000119930 345 ntBASIC13.9□□□□□ -0.18
Trim80Q3V061 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim80Q3V061 Gm10275-202ENSMUST00000168697 495 ntBASIC13.9□□□□□ -0.18
Trim80Q3V061 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim80Q3V061 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim80Q3V061 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim80Q3V061 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim80Q3V061 Gm10275-201ENSMUST00000092620 635 ntBASIC13.9□□□□□ -0.18
Trim80Q3V061 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim80Q3V061 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim80Q3V061 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim80Q3V061 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim80Q3V061 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim80Q3V061 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim80Q3V061 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trim80Q3V061 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.19
Trim80Q3V061 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim80Q3V061 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim80Q3V061 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim80Q3V061 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim80Q3V061 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim80Q3V061 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim80Q3V061 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim80Q3V061 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim80Q3V061 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim80Q3V061 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trim80Q3V061 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim80Q3V061 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim80Q3V061 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trim80Q3V061 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.89□□□□□ -0.19
Trim80Q3V061 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.89□□□□□ -0.19
Trim80Q3V061 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim80Q3V061 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim80Q3V061 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.89□□□□□ -0.19
Trim80Q3V061 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim80Q3V061 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trim80Q3V061 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim80Q3V061 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim80Q3V061 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim80Q3V061 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms