Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.9□□□□□ -0.5
Chd8Q09XV5 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Gm12990-201ENSMUST00000120372 468 ntBASIC11.9□□□□□ -0.5
Chd8Q09XV5 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Gm4482-201ENSMUST00000200876 742 ntBASIC11.9□□□□□ -0.5
Chd8Q09XV5 Gm35713-201ENSMUST00000210516 199 ntBASIC11.9□□□□□ -0.5
Chd8Q09XV5 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.9□□□□□ -0.5
Chd8Q09XV5 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.9□□□□□ -0.5
Chd8Q09XV5 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Gm21811-201ENSMUST00000096485 930 ntBASIC11.9□□□□□ -0.5
Chd8Q09XV5 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chd8Q09XV5 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Chd8Q09XV5 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Chd8Q09XV5 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Chd8Q09XV5 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.9□□□□□ -0.51
Chd8Q09XV5 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Chd8Q09XV5 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Gm6855-201ENSMUST00000206307 790 ntBASIC11.89□□□□□ -0.51
Chd8Q09XV5 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Gm28071-201ENSMUST00000190355 478 ntBASIC11.89□□□□□ -0.51
Chd8Q09XV5 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Gm45594-201ENSMUST00000211717 241 ntBASIC11.89□□□□□ -0.51
Chd8Q09XV5 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.89□□□□□ -0.51
Chd8Q09XV5 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.89□□□□□ -0.51
Chd8Q09XV5 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chd8Q09XV5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Gm12058-201ENSMUST00000118614 437 ntBASIC11.88□□□□□ -0.51
Chd8Q09XV5 Gm15711-201ENSMUST00000118889 535 ntBASIC11.88□□□□□ -0.51
Chd8Q09XV5 Gm23675-201ENSMUST00000157311 125 ntBASIC11.88□□□□□ -0.51
Chd8Q09XV5 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.88□□□□□ -0.51
Chd8Q09XV5 Gm29808-201ENSMUST00000194419 468 ntBASIC11.88□□□□□ -0.51
Chd8Q09XV5 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.88□□□□□ -0.51
Chd8Q09XV5 Gm18059-201ENSMUST00000208073 580 ntBASIC11.88□□□□□ -0.51
Chd8Q09XV5 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.88□□□□□ -0.51
Chd8Q09XV5 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.88□□□□□ -0.51
Chd8Q09XV5 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chd8Q09XV5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms