Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sox4Q06831 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.2□□□□□ -0.3
Sox4Q06831 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.2□□□□□ -0.3
Sox4Q06831 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.2□□□□□ -0.3
Sox4Q06831 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.2□□□□□ -0.3
Sox4Q06831 Gm5035-201ENSMUST00000215581 927 ntBASIC13.2□□□□□ -0.3
Sox4Q06831 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Sox4Q06831 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sox4Q06831 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sox4Q06831 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sox4Q06831 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sox4Q06831 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox4Q06831 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.19□□□□□ -0.3
Sox4Q06831 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sox4Q06831 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.19□□□□□ -0.3
Sox4Q06831 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.19□□□□□ -0.3
Sox4Q06831 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Gm7287-201ENSMUST00000205267 602 ntBASIC13.19□□□□□ -0.3
Sox4Q06831 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.19□□□□□ -0.3
Sox4Q06831 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sox4Q06831 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sox4Q06831 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Sox4Q06831 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.19□□□□□ -0.3
Sox4Q06831 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Sox4Q06831 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.19□□□□□ -0.3
Sox4Q06831 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox4Q06831 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Sox4Q06831 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.19□□□□□ -0.3
Sox4Q06831 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.19□□□□□ -0.3
Sox4Q06831 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.18□□□□□ -0.3
Sox4Q06831 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sox4Q06831 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.18□□□□□ -0.3
Sox4Q06831 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox4Q06831 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Sox4Q06831 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox4Q06831 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Mir1894-201ENSMUST00000122802 81 ntBASIC13.18□□□□□ -0.3
Sox4Q06831 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.18□□□□□ -0.3
Sox4Q06831 Gm38671-201ENSMUST00000200573 130 ntBASIC13.18□□□□□ -0.3
Sox4Q06831 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.18□□□□□ -0.3
Sox4Q06831 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.18□□□□□ -0.3
Sox4Q06831 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox4Q06831 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms