Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Col9a1Q05722 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Col9a1Q05722 Gm11652-201ENSMUST00000117842 1267 ntBASIC13.24□□□□□ -0.29
Col9a1Q05722 Gm12656-201ENSMUST00000118149 577 ntBASIC13.24□□□□□ -0.29
Col9a1Q05722 Gm15225-201ENSMUST00000120449 1017 ntBASIC13.24□□□□□ -0.29
Col9a1Q05722 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.24□□□□□ -0.29
Col9a1Q05722 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC13.24□□□□□ -0.29
Col9a1Q05722 Gm10051-201ENSMUST00000145209 414 ntBASIC13.24□□□□□ -0.29
Col9a1Q05722 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Gm19353-201ENSMUST00000184561 445 ntBASIC13.24□□□□□ -0.29
Col9a1Q05722 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.24□□□□□ -0.29
Col9a1Q05722 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC13.24□□□□□ -0.29
Col9a1Q05722 Gm38384-201ENSMUST00000195413 1122 ntBASIC13.24□□□□□ -0.29
Col9a1Q05722 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC13.24□□□□□ -0.29
Col9a1Q05722 Gm44038-201ENSMUST00000203952 889 ntBASIC13.24□□□□□ -0.29
Col9a1Q05722 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.24□□□□□ -0.29
Col9a1Q05722 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.24□□□□□ -0.29
Col9a1Q05722 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.24□□□□□ -0.29
Col9a1Q05722 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.24□□□□□ -0.29
Col9a1Q05722 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Col9a1Q05722 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Col9a1Q05722 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Col9a1Q05722 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.24□□□□□ -0.29
Col9a1Q05722 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Col9a1Q05722 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a1Q05722 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a1Q05722 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a1Q05722 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC13.23□□□□□ -0.29
Col9a1Q05722 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.23□□□□□ -0.29
Col9a1Q05722 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.23□□□□□ -0.29
Col9a1Q05722 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a1Q05722 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col9a1Q05722 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.23□□□□□ -0.29
Col9a1Q05722 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Col9a1Q05722 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a1Q05722 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a1Q05722 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a1Q05722 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col9a1Q05722 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a1Q05722 Mir706-201ENSMUST00000102262 84 ntBASIC13.23□□□□□ -0.29
Col9a1Q05722 Gm14109-201ENSMUST00000118814 309 ntBASIC13.23□□□□□ -0.29
Col9a1Q05722 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a1Q05722 Gm2231-201ENSMUST00000125661 612 ntBASIC13.23□□□□□ -0.29
Col9a1Q05722 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col9a1Q05722 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC13.23□□□□□ -0.29
Col9a1Q05722 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.23□□□□□ -0.29
Col9a1Q05722 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col9a1Q05722 Gm22877-201ENSMUST00000175451 105 ntBASIC13.23□□□□□ -0.29
Col9a1Q05722 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a1Q05722 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Col9a1Q05722 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.23□□□□□ -0.29
Col9a1Q05722 Gm37809-201ENSMUST00000195050 931 ntBASIC13.23□□□□□ -0.29
Col9a1Q05722 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col9a1Q05722 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC13.23□□□□□ -0.29
Col9a1Q05722 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col9a1Q05722 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a1Q05722 Gm45527-201ENSMUST00000211052 774 ntBASIC13.23□□□□□ -0.29
Col9a1Q05722 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC13.23□□□□□ -0.29
Col9a1Q05722 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a1Q05722 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col9a1Q05722 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a1Q05722 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a1Q05722 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a1Q05722 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a1Q05722 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a1Q05722 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col9a1Q05722 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a1Q05722 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a1Q05722 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a1Q05722 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a1Q05722 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Col9a1Q05722 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a1Q05722 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a1Q05722 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Col9a1Q05722 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.22□□□□□ -0.29
Col9a1Q05722 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a1Q05722 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.22□□□□□ -0.29
Col9a1Q05722 Gm21139-201ENSMUST00000186594 877 ntBASIC13.22□□□□□ -0.29
Col9a1Q05722 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC13.22□□□□□ -0.29
Col9a1Q05722 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col9a1Q05722 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col9a1Q05722 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC13.22□□□□□ -0.29
Col9a1Q05722 Gm9111-201ENSMUST00000219394 709 ntBASIC13.22□□□□□ -0.29
Col9a1Q05722 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.22□□□□□ -0.29
Col9a1Q05722 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms