Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Sox9Q04887 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox9Q04887 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox9Q04887 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sox9Q04887 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox9Q04887 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox9Q04887 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sox9Q04887 Gm11637-201ENSMUST00000120601 592 ntBASIC13.84□□□□□ -0.19
Sox9Q04887 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox9Q04887 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.84□□□□□ -0.19
Sox9Q04887 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox9Q04887 Gm20426-201ENSMUST00000173657 440 ntBASIC13.84□□□□□ -0.19
Sox9Q04887 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.84□□□□□ -0.19
Sox9Q04887 Gm27438-201ENSMUST00000183480 110 ntBASIC13.84□□□□□ -0.19
Sox9Q04887 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.84□□□□□ -0.19
Sox9Q04887 Gm44100-201ENSMUST00000204329 436 ntBASIC13.84□□□□□ -0.19
Sox9Q04887 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.84□□□□□ -0.19
Sox9Q04887 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.84□□□□□ -0.19
Sox9Q04887 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.84□□□□□ -0.19
Sox9Q04887 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox9Q04887 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sox9Q04887 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox9Q04887 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Sox9Q04887 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox9Q04887 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.84□□□□□ -0.19
Sox9Q04887 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox9Q04887 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox9Q04887 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.84□□□□□ -0.19
Sox9Q04887 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sox9Q04887 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.84□□□□□ -0.19
Sox9Q04887 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Sox9Q04887 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sox9Q04887 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sox9Q04887 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox9Q04887 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.83□□□□□ -0.19
Sox9Q04887 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Sox9Q04887 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox9Q04887 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sox9Q04887 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox9Q04887 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Sox9Q04887 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox9Q04887 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox9Q04887 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox9Q04887 Gm16202-201ENSMUST00000117532 544 ntBASIC13.83□□□□□ -0.2
Sox9Q04887 Gm13316-201ENSMUST00000140537 691 ntBASIC13.83□□□□□ -0.2
Sox9Q04887 Gm28450-201ENSMUST00000187349 638 ntBASIC13.83□□□□□ -0.2
Sox9Q04887 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.83□□□□□ -0.2
Sox9Q04887 Gm44069-201ENSMUST00000204898 506 ntBASIC13.83□□□□□ -0.2
Sox9Q04887 Gm4768-201ENSMUST00000206199 686 ntBASIC13.83□□□□□ -0.2
Sox9Q04887 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.83□□□□□ -0.2
Sox9Q04887 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox9Q04887 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox9Q04887 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox9Q04887 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Sox9Q04887 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.83□□□□□ -0.2
Sox9Q04887 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox9Q04887 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Sox9Q04887 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox9Q04887 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox9Q04887 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sox9Q04887 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sox9Q04887 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sox9Q04887 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox9Q04887 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sox9Q04887 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox9Q04887 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox9Q04887 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox9Q04887 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sox9Q04887 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox9Q04887 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox9Q04887 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox9Q04887 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox9Q04887 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox9Q04887 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.82□□□□□ -0.2
Sox9Q04887 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox9Q04887 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox9Q04887 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sox9Q04887 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.82□□□□□ -0.2
Sox9Q04887 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox9Q04887 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.82□□□□□ -0.2
Sox9Q04887 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox9Q04887 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sox9Q04887 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.82□□□□□ -0.2
Sox9Q04887 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sox9Q04887 Gm14208-201ENSMUST00000119645 678 ntBASIC13.82□□□□□ -0.2
Sox9Q04887 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.82□□□□□ -0.2
Sox9Q04887 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.82□□□□□ -0.2
Sox9Q04887 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.82□□□□□ -0.2
Sox9Q04887 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.82□□□□□ -0.2
Sox9Q04887 Gm26185-201ENSMUST00000157692 266 ntBASIC13.82□□□□□ -0.2
Sox9Q04887 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox9Q04887 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sox9Q04887 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.82□□□□□ -0.2
Sox9Q04887 Gm45118-201ENSMUST00000208928 825 ntBASIC13.82□□□□□ -0.2
Sox9Q04887 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.82□□□□□ -0.2
Sox9Q04887 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox9Q04887 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox9Q04887 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox9Q04887 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox9Q04887 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms