Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.82□□□□□ -0.04
Col6a1Q04857 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a1Q04857 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a1Q04857 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
Col6a1Q04857 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.82□□□□□ -0.04
Col6a1Q04857 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.82□□□□□ -0.04
Col6a1Q04857 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col6a1Q04857 Gm27341-201ENSMUST00000183570 106 ntBASIC14.82□□□□□ -0.04
Col6a1Q04857 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a1Q04857 Gm6621-201ENSMUST00000193251 772 ntBASIC14.82□□□□□ -0.04
Col6a1Q04857 Gm37497-201ENSMUST00000195830 798 ntBASIC14.82□□□□□ -0.04
Col6a1Q04857 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Col6a1Q04857 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a1Q04857 Gm6082-201ENSMUST00000215204 454 ntBASIC14.82□□□□□ -0.04
Col6a1Q04857 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a1Q04857 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a1Q04857 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
Col6a1Q04857 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.82□□□□□ -0.04
Col6a1Q04857 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a1Q04857 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a1Q04857 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col6a1Q04857 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a1Q04857 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.82□□□□□ -0.04
Col6a1Q04857 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col6a1Q04857 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a1Q04857 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a1Q04857 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a1Q04857 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a1Q04857 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.82□□□□□ -0.04
Col6a1Q04857 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.81□□□□□ -0.04
Col6a1Q04857 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col6a1Q04857 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col6a1Q04857 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.81□□□□□ -0.04
Col6a1Q04857 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Gm7029-201ENSMUST00000173226 450 ntBASIC14.81□□□□□ -0.04
Col6a1Q04857 Rps4l-202ENSMUST00000204242 789 ntBASIC14.81□□□□□ -0.04
Col6a1Q04857 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col6a1Q04857 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col6a1Q04857 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.81□□□□□ -0.04
Col6a1Q04857 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.81□□□□□ -0.04
Col6a1Q04857 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a1Q04857 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a1Q04857 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.8□□□□□ -0.04
Col6a1Q04857 Matn2-206ENSMUST00000228570 2798 ntBASIC14.8□□□□□ -0.04
Col6a1Q04857 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a1Q04857 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col6a1Q04857 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a1Q04857 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a1Q04857 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.8□□□□□ -0.04
Col6a1Q04857 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a1Q04857 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.8□□□□□ -0.04
Col6a1Q04857 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a1Q04857 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.8□□□□□ -0.04
Col6a1Q04857 Gm22902-201ENSMUST00000158488 302 ntBASIC14.8□□□□□ -0.04
Col6a1Q04857 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.8□□□□□ -0.04
Col6a1Q04857 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.8□□□□□ -0.04
Col6a1Q04857 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a1Q04857 Gm16505-201ENSMUST00000179981 232 ntBASIC14.8□□□□□ -0.04
Col6a1Q04857 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.8□□□□□ -0.04
Col6a1Q04857 Gm38158-201ENSMUST00000194617 339 ntBASIC14.8□□□□□ -0.04
Col6a1Q04857 Gm10608-202ENSMUST00000213924 676 ntBASIC14.8□□□□□ -0.04
Col6a1Q04857 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.8□□□□□ -0.04
Col6a1Q04857 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a1Q04857 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a1Q04857 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a1Q04857 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a1Q04857 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a1Q04857 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a1Q04857 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a1Q04857 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.8□□□□□ -0.04
Col6a1Q04857 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Col6a1Q04857 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a1Q04857 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a1Q04857 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Col6a1Q04857 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a1Q04857 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a1Q04857 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a1Q04857 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a1Q04857 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.79□□□□□ -0.04
Col6a1Q04857 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.79□□□□□ -0.04
Col6a1Q04857 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col6a1Q04857 Gm13369-201ENSMUST00000119442 987 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms