Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcr5Q04683 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcr5Q04683 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cxcr5Q04683 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cxcr5Q04683 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcr5Q04683 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcr5Q04683 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcr5Q04683 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.8□□□□□ -0.36
Cxcr5Q04683 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcr5Q04683 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Cxcr5Q04683 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcr5Q04683 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cxcr5Q04683 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Cxcr5Q04683 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcr5Q04683 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcr5Q04683 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.79□□□□□ -0.36
Cxcr5Q04683 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcr5Q04683 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.79□□□□□ -0.36
Cxcr5Q04683 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.79□□□□□ -0.36
Cxcr5Q04683 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Gm3436-201ENSMUST00000179930 840 ntBASIC12.79□□□□□ -0.36
Cxcr5Q04683 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Gm43514-201ENSMUST00000198852 424 ntBASIC12.79□□□□□ -0.36
Cxcr5Q04683 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.79□□□□□ -0.36
Cxcr5Q04683 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Cxcr5Q04683 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Cxcr5Q04683 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcr5Q04683 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Gm11594-201ENSMUST00000122313 162 ntBASIC12.78□□□□□ -0.36
Cxcr5Q04683 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cxcr5Q04683 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.78□□□□□ -0.36
Cxcr5Q04683 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.78□□□□□ -0.36
Cxcr5Q04683 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cxcr5Q04683 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Cxcr5Q04683 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cxcr5Q04683 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cxcr5Q04683 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cxcr5Q04683 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cxcr5Q04683 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cxcr5Q04683 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cxcr5Q04683 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cxcr5Q04683 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Cxcr5Q04683 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcr5Q04683 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cxcr5Q04683 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms