Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cacna1aP97445 Gm11964-201ENSMUST00000120982 444 ntBASIC12.39□□□□□ -0.43
Cacna1aP97445 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.39□□□□□ -0.43
Cacna1aP97445 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.39□□□□□ -0.43
Cacna1aP97445 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cacna1aP97445 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.39□□□□□ -0.43
Cacna1aP97445 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Cacna1aP97445 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.39□□□□□ -0.43
Cacna1aP97445 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cacna1aP97445 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cacna1aP97445 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cacna1aP97445 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cacna1aP97445 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cacna1aP97445 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cacna1aP97445 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cacna1aP97445 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cacna1aP97445 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cacna1aP97445 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cacna1aP97445 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cacna1aP97445 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cacna1aP97445 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cacna1aP97445 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cacna1aP97445 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cacna1aP97445 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cacna1aP97445 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cacna1aP97445 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cacna1aP97445 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.39□□□□□ -0.43
Cacna1aP97445 Mir698-201ENSMUST00000102164 109 ntBASIC12.38□□□□□ -0.43
Cacna1aP97445 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.38□□□□□ -0.43
Cacna1aP97445 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.38□□□□□ -0.43
Cacna1aP97445 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.38□□□□□ -0.43
Cacna1aP97445 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.38□□□□□ -0.43
Cacna1aP97445 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cacna1aP97445 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cacna1aP97445 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.38□□□□□ -0.43
Cacna1aP97445 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.38□□□□□ -0.43
Cacna1aP97445 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.38□□□□□ -0.43
Cacna1aP97445 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Gm4986-201ENSMUST00000119731 549 ntBASIC12.38□□□□□ -0.43
Cacna1aP97445 Gm12208-201ENSMUST00000122004 163 ntBASIC12.38□□□□□ -0.43
Cacna1aP97445 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Cacna1aP97445 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.38□□□□□ -0.43
Cacna1aP97445 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.38□□□□□ -0.43
Cacna1aP97445 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Gm2260-201ENSMUST00000184965 657 ntBASIC12.38□□□□□ -0.43
Cacna1aP97445 Gm21769-201ENSMUST00000211922 111 ntBASIC12.38□□□□□ -0.43
Cacna1aP97445 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.38□□□□□ -0.43
Cacna1aP97445 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.38□□□□□ -0.43
Cacna1aP97445 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cacna1aP97445 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.38□□□□□ -0.43
Cacna1aP97445 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cacna1aP97445 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cacna1aP97445 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cacna1aP97445 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cacna1aP97445 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cacna1aP97445 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cacna1aP97445 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.37□□□□□ -0.43
Cacna1aP97445 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cacna1aP97445 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.37□□□□□ -0.43
Cacna1aP97445 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cacna1aP97445 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cacna1aP97445 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cacna1aP97445 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.37□□□□□ -0.43
Cacna1aP97445 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cacna1aP97445 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cacna1aP97445 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cacna1aP97445 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cacna1aP97445 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cacna1aP97445 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cacna1aP97445 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cacna1aP97445 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cacna1aP97445 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cacna1aP97445 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.37□□□□□ -0.43
Cacna1aP97445 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms