Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Gm6983-201ENSMUST00000214912 628 ntBASIC11.98□□□□□ -0.49
SgcbP82349 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
SgcbP82349 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SgcbP82349 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
SgcbP82349 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.98□□□□□ -0.49
SgcbP82349 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SgcbP82349 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SgcbP82349 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
SgcbP82349 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
SgcbP82349 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SgcbP82349 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SgcbP82349 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.97□□□□□ -0.49
SgcbP82349 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
SgcbP82349 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
SgcbP82349 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Gm15806-201ENSMUST00000120696 955 ntBASIC11.97□□□□□ -0.49
SgcbP82349 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Gm9002-201ENSMUST00000178437 499 ntBASIC11.97□□□□□ -0.49
SgcbP82349 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.97□□□□□ -0.49
SgcbP82349 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.97□□□□□ -0.49
SgcbP82349 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Gm6991-201ENSMUST00000218475 1178 ntBASIC11.97□□□□□ -0.49
SgcbP82349 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.97□□□□□ -0.49
SgcbP82349 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.97□□□□□ -0.49
SgcbP82349 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Gm5356-201ENSMUST00000093326 615 ntBASIC11.97□□□□□ -0.49
SgcbP82349 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SgcbP82349 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.97□□□□□ -0.49
SgcbP82349 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SgcbP82349 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.96□□□□□ -0.49
SgcbP82349 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
SgcbP82349 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
SgcbP82349 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.96□□□□□ -0.49
SgcbP82349 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
SgcbP82349 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.96□□□□□ -0.49
SgcbP82349 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.96□□□□□ -0.49
SgcbP82349 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.96□□□□□ -0.49
SgcbP82349 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
SgcbP82349 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
SgcbP82349 Gm15678-201ENSMUST00000117573 960 ntBASIC11.96□□□□□ -0.49
SgcbP82349 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.96□□□□□ -0.49
SgcbP82349 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
SgcbP82349 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.96□□□□□ -0.49
SgcbP82349 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SgcbP82349 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms