Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SgcdP82347 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.49□□□□□ -0.41
SgcdP82347 Gm5866-201ENSMUST00000177881 973 ntBASIC12.49□□□□□ -0.41
SgcdP82347 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.49□□□□□ -0.41
SgcdP82347 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SgcdP82347 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.49□□□□□ -0.41
SgcdP82347 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.49□□□□□ -0.41
SgcdP82347 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.49□□□□□ -0.41
SgcdP82347 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SgcdP82347 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.49□□□□□ -0.41
SgcdP82347 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcdP82347 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SgcdP82347 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SgcdP82347 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SgcdP82347 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcdP82347 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SgcdP82347 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcdP82347 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SgcdP82347 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcdP82347 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SgcdP82347 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SgcdP82347 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SgcdP82347 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SgcdP82347 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SgcdP82347 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.48□□□□□ -0.41
SgcdP82347 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
SgcdP82347 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.48□□□□□ -0.41
SgcdP82347 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.48□□□□□ -0.41
SgcdP82347 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.48□□□□□ -0.41
SgcdP82347 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.48□□□□□ -0.41
SgcdP82347 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SgcdP82347 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.48□□□□□ -0.41
SgcdP82347 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SgcdP82347 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.48□□□□□ -0.41
SgcdP82347 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.48□□□□□ -0.41
SgcdP82347 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.48□□□□□ -0.41
SgcdP82347 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SgcdP82347 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcdP82347 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SgcdP82347 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcdP82347 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SgcdP82347 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcdP82347 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SgcdP82347 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SgcdP82347 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcdP82347 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcdP82347 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcdP82347 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SgcdP82347 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SgcdP82347 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.47□□□□□ -0.41
SgcdP82347 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.47□□□□□ -0.41
SgcdP82347 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SgcdP82347 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcdP82347 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcdP82347 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcdP82347 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
SgcdP82347 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcdP82347 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcdP82347 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcdP82347 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcdP82347 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SgcdP82347 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SgcdP82347 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms