Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shox2P70390 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shox2P70390 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shox2P70390 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shox2P70390 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shox2P70390 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shox2P70390 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shox2P70390 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Shox2P70390 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Shox2P70390 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shox2P70390 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shox2P70390 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Shox2P70390 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.26□□□□□ -0.29
Shox2P70390 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Shox2P70390 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Shox2P70390 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.25□□□□□ -0.29
Shox2P70390 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Shox2P70390 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
Shox2P70390 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.25□□□□□ -0.29
Shox2P70390 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.25□□□□□ -0.29
Shox2P70390 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.25□□□□□ -0.29
Shox2P70390 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.25□□□□□ -0.29
Shox2P70390 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Shox2P70390 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Shox2P70390 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Shox2P70390 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 Gm44124-201ENSMUST00000204159 472 ntBASIC13.25□□□□□ -0.29
Shox2P70390 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.25□□□□□ -0.29
Shox2P70390 Gm18669-201ENSMUST00000216049 778 ntBASIC13.25□□□□□ -0.29
Shox2P70390 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.25□□□□□ -0.29
Shox2P70390 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shox2P70390 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Shox2P70390 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.25□□□□□ -0.29
Shox2P70390 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Shox2P70390 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.24□□□□□ -0.29
Shox2P70390 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.24□□□□□ -0.29
Shox2P70390 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.24□□□□□ -0.29
Shox2P70390 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.24□□□□□ -0.29
Shox2P70390 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.24□□□□□ -0.29
Shox2P70390 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.24□□□□□ -0.29
Shox2P70390 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Shox2P70390 Gm6222-201ENSMUST00000120787 396 ntBASIC13.24□□□□□ -0.29
Shox2P70390 Gm7862-201ENSMUST00000121461 292 ntBASIC13.24□□□□□ -0.29
Shox2P70390 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Rpph1-201ENSMUST00000175096 319 ntBASIC13.24□□□□□ -0.29
Shox2P70390 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Shox2P70390 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Shox2P70390 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Shox2P70390 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.24□□□□□ -0.29
Shox2P70390 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Shox2P70390 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Shox2P70390 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Shox2P70390 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Shox2P70390 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms