Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Msx3P70354 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Msx3P70354 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Msx3P70354 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Msx3P70354 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msx3P70354 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.82□□□□□ -0.2
Msx3P70354 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.81□□□□□ -0.2
Msx3P70354 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.81□□□□□ -0.2
Msx3P70354 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.81□□□□□ -0.2
Msx3P70354 Gm15321-201ENSMUST00000121290 288 ntBASIC13.81□□□□□ -0.2
Msx3P70354 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.81□□□□□ -0.2
Msx3P70354 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Gm26464-201ENSMUST00000157094 305 ntBASIC13.81□□□□□ -0.2
Msx3P70354 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Gm28760-201ENSMUST00000185995 736 ntBASIC13.81□□□□□ -0.2
Msx3P70354 Gm43094-201ENSMUST00000196549 921 ntBASIC13.81□□□□□ -0.2
Msx3P70354 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.81□□□□□ -0.2
Msx3P70354 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Gm19078-201ENSMUST00000206311 727 ntBASIC13.81□□□□□ -0.2
Msx3P70354 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Msx3P70354 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Msx3P70354 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.81□□□□□ -0.2
Msx3P70354 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Msx3P70354 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Msx3P70354 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx3P70354 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Msx3P70354 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Msx3P70354 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx3P70354 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx3P70354 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx3P70354 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx3P70354 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Msx3P70354 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Msx3P70354 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx3P70354 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Msx3P70354 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Msx3P70354 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Msx3P70354 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Msx3P70354 Mir7221-201ENSMUST00000184009 72 ntBASIC13.8□□□□□ -0.2
Msx3P70354 Gm45841-201ENSMUST00000207700 164 ntBASIC13.8□□□□□ -0.2
Msx3P70354 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.8□□□□□ -0.2
Msx3P70354 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx3P70354 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx3P70354 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Msx3P70354 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.8□□□□□ -0.2
Msx3P70354 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Msx3P70354 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx3P70354 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Msx3P70354 Syt7-204ENSMUST00000223586 1344 ntBASIC13.8□□□□□ -0.2
Msx3P70354 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Msx3P70354 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx3P70354 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx3P70354 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx3P70354 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Msx3P70354 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx3P70354 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Msx3P70354 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Msx3P70354 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.79□□□□□ -0.2
Msx3P70354 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Msx3P70354 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx3P70354 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx3P70354 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx3P70354 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx3P70354 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx3P70354 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx3P70354 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx3P70354 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx3P70354 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx3P70354 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Msx3P70354 Gm22189-201ENSMUST00000103822 86 ntBASIC13.79□□□□□ -0.2
Msx3P70354 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Msx3P70354 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.79□□□□□ -0.2
Msx3P70354 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms