Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pdlim4P70271 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pdlim4P70271 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.62
Pdlim4P70271 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pdlim4P70271 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Pdlim4P70271 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.21□□□□□ -0.62
Pdlim4P70271 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pdlim4P70271 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.21□□□□□ -0.62
Pdlim4P70271 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pdlim4P70271 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pdlim4P70271 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pdlim4P70271 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pdlim4P70271 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pdlim4P70271 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.21□□□□□ -0.62
Pdlim4P70271 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.21□□□□□ -0.62
Pdlim4P70271 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.2□□□□□ -0.62
Pdlim4P70271 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pdlim4P70271 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.2□□□□□ -0.62
Pdlim4P70271 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Pdlim4P70271 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.2□□□□□ -0.62
Pdlim4P70271 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pdlim4P70271 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pdlim4P70271 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.2□□□□□ -0.62
Pdlim4P70271 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.2□□□□□ -0.62
Pdlim4P70271 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.2□□□□□ -0.62
Pdlim4P70271 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pdlim4P70271 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Gm5354-201ENSMUST00000182417 973 ntBASIC11.2□□□□□ -0.62
Pdlim4P70271 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Pdlim4P70271 Gm28631-201ENSMUST00000190740 334 ntBASIC11.2□□□□□ -0.62
Pdlim4P70271 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.2□□□□□ -0.62
Pdlim4P70271 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.2□□□□□ -0.62
Pdlim4P70271 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pdlim4P70271 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.2□□□□□ -0.62
Pdlim4P70271 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.2□□□□□ -0.62
Pdlim4P70271 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.2□□□□□ -0.62
Pdlim4P70271 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pdlim4P70271 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pdlim4P70271 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pdlim4P70271 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pdlim4P70271 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.2□□□□□ -0.62
Pdlim4P70271 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Pdlim4P70271 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Pdlim4P70271 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.19□□□□□ -0.62
Pdlim4P70271 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.19□□□□□ -0.62
Pdlim4P70271 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Pdlim4P70271 Gm15770-201ENSMUST00000117498 584 ntBASIC11.19□□□□□ -0.62
Pdlim4P70271 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.19□□□□□ -0.62
Pdlim4P70271 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.19□□□□□ -0.62
Pdlim4P70271 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms