Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Gabra1P62812 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gabra1P62812 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gabra1P62812 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Gabra1P62812 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gabra1P62812 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Gabra1P62812 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gabra1P62812 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gabra1P62812 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Gabra1P62812 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.28□□□□□ -0.6
Gabra1P62812 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Gabra1P62812 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Gabra1P62812 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.28□□□□□ -0.6
Gabra1P62812 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Gabra1P62812 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.28□□□□□ -0.6
Gabra1P62812 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Gabra1P62812 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Gabra1P62812 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.28□□□□□ -0.6
Gabra1P62812 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.28□□□□□ -0.6
Gabra1P62812 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Gabra1P62812 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.28□□□□□ -0.6
Gabra1P62812 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Gabra1P62812 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.28□□□□□ -0.6
Gabra1P62812 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gabra1P62812 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.27□□□□□ -0.6
Gabra1P62812 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gabra1P62812 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gabra1P62812 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Gabra1P62812 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gabra1P62812 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gabra1P62812 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gabra1P62812 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.27□□□□□ -0.6
Gabra1P62812 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gabra1P62812 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gabra1P62812 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gabra1P62812 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
Gabra1P62812 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Gabra1P62812 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Gabra1P62812 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.27□□□□□ -0.61
Gabra1P62812 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.27□□□□□ -0.61
Gabra1P62812 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.27□□□□□ -0.61
Gabra1P62812 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.27□□□□□ -0.61
Gabra1P62812 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Gabra1P62812 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.27□□□□□ -0.61
Gabra1P62812 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Mir8098-201ENSMUST00000184011 137 ntBASIC11.27□□□□□ -0.61
Gabra1P62812 Gm29741-201ENSMUST00000192667 421 ntBASIC11.27□□□□□ -0.61
Gabra1P62812 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.27□□□□□ -0.61
Gabra1P62812 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Gabra1P62812 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.27□□□□□ -0.61
Gabra1P62812 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms