Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lsm5P62322 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lsm5P62322 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Lsm5P62322 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lsm5P62322 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lsm5P62322 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lsm5P62322 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Lsm5P62322 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lsm5P62322 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Lsm5P62322 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lsm5P62322 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Lsm5P62322 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.16□□□□□ -0.62
Lsm5P62322 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.16□□□□□ -0.62
Lsm5P62322 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.16□□□□□ -0.62
Lsm5P62322 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.16□□□□□ -0.62
Lsm5P62322 Gm27628-201ENSMUST00000184911 107 ntBASIC11.16□□□□□ -0.62
Lsm5P62322 Gm34391-201ENSMUST00000203706 907 ntBASIC11.16□□□□□ -0.62
Lsm5P62322 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Birc2-201ENSMUST00000054878 378 ntBASIC11.16□□□□□ -0.62
Lsm5P62322 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Lsm5P62322 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.16□□□□□ -0.62
Lsm5P62322 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Lsm5P62322 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Lsm5P62322 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Lsm5P62322 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Lsm5P62322 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lsm5P62322 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lsm5P62322 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Lsm5P62322 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lsm5P62322 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.15□□□□□ -0.62
Lsm5P62322 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.15□□□□□ -0.62
Lsm5P62322 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lsm5P62322 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lsm5P62322 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lsm5P62322 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Lsm5P62322 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lsm5P62322 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lsm5P62322 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lsm5P62322 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lsm5P62322 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lsm5P62322 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lsm5P62322 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Lsm5P62322 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lsm5P62322 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lsm5P62322 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.15□□□□□ -0.62
Lsm5P62322 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lsm5P62322 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Lsm5P62322 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lsm5P62322 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.15□□□□□ -0.62
Lsm5P62322 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.15□□□□□ -0.62
Lsm5P62322 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lsm5P62322 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Lsm5P62322 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Lsm5P62322 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Lsm5P62322 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lsm5P62322 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Lsm5P62322 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Lsm5P62322 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Lsm5P62322 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.15□□□□□ -0.63
Lsm5P62322 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Lsm5P62322 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
Lsm5P62322 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Lsm5P62322 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lsm5P62322 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Lsm5P62322 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.14□□□□□ -0.63
Lsm5P62322 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms