Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Sec61a1P61620 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Sec61a1P61620 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.86□□□□□ -0.51
Sec61a1P61620 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Sec61a1P61620 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Sec61a1P61620 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.86□□□□□ -0.51
Sec61a1P61620 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.86□□□□□ -0.51
Sec61a1P61620 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.86□□□□□ -0.51
Sec61a1P61620 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Sec61a1P61620 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.86□□□□□ -0.51
Sec61a1P61620 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.86□□□□□ -0.51
Sec61a1P61620 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sec61a1P61620 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Sec61a1P61620 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sec61a1P61620 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sec61a1P61620 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.85□□□□□ -0.51
Sec61a1P61620 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.85□□□□□ -0.51
Sec61a1P61620 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sec61a1P61620 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Sec61a1P61620 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.85□□□□□ -0.51
Sec61a1P61620 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.85□□□□□ -0.51
Sec61a1P61620 Gm27680-201ENSMUST00000184192 160 ntBASIC11.85□□□□□ -0.51
Sec61a1P61620 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.85□□□□□ -0.51
Sec61a1P61620 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.85□□□□□ -0.51
Sec61a1P61620 Gm7775-201ENSMUST00000218871 853 ntBASIC11.85□□□□□ -0.51
Sec61a1P61620 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.85□□□□□ -0.51
Sec61a1P61620 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sec61a1P61620 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sec61a1P61620 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a1P61620 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Sec61a1P61620 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Sec61a1P61620 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.84□□□□□ -0.51
Sec61a1P61620 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.84□□□□□ -0.51
Sec61a1P61620 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.84□□□□□ -0.51
Sec61a1P61620 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.84□□□□□ -0.51
Sec61a1P61620 Gm15487-201ENSMUST00000122373 465 ntBASIC11.84□□□□□ -0.51
Sec61a1P61620 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Mir8102-201ENSMUST00000184148 139 ntBASIC11.84□□□□□ -0.51
Sec61a1P61620 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.84□□□□□ -0.51
Sec61a1P61620 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Gm45453-201ENSMUST00000211758 853 ntBASIC11.84□□□□□ -0.51
Sec61a1P61620 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Gm46209-201ENSMUST00000217912 553 ntBASIC11.84□□□□□ -0.51
Sec61a1P61620 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.84□□□□□ -0.51
Sec61a1P61620 Gm16476-201ENSMUST00000221544 139 ntBASIC11.84□□□□□ -0.51
Sec61a1P61620 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a1P61620 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Sec61a1P61620 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms