Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nphp4P59240 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Nphp4P59240 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC17.99■□□□□ 0.47
Nphp4P59240 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nphp4P59240 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nphp4P59240 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nphp4P59240 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nphp4P59240 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nphp4P59240 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nphp4P59240 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Nphp4P59240 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Nphp4P59240 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nphp4P59240 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Nphp4P59240 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC17.98■□□□□ 0.47
Nphp4P59240 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC17.98■□□□□ 0.47
Nphp4P59240 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nphp4P59240 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nphp4P59240 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nphp4P59240 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nphp4P59240 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nphp4P59240 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nphp4P59240 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC17.98■□□□□ 0.47
Nphp4P59240 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nphp4P59240 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nphp4P59240 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nphp4P59240 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Nphp4P59240 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC17.98■□□□□ 0.47
Nphp4P59240 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nphp4P59240 Gm4857-201ENSMUST00000192718 785 ntBASIC17.98■□□□□ 0.47
Nphp4P59240 Gm18916-201ENSMUST00000198264 1246 ntBASIC17.98■□□□□ 0.47
Nphp4P59240 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC17.98■□□□□ 0.47
Nphp4P59240 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC17.98■□□□□ 0.47
Nphp4P59240 AC132317.1-201ENSMUST00000227227 962 ntBASIC17.98■□□□□ 0.47
Nphp4P59240 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nphp4P59240 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nphp4P59240 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nphp4P59240 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nphp4P59240 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nphp4P59240 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Nphp4P59240 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nphp4P59240 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nphp4P59240 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nphp4P59240 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Nphp4P59240 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Nphp4P59240 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.97■□□□□ 0.47
Nphp4P59240 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nphp4P59240 Gm9025-201ENSMUST00000122415 1575 ntBASIC17.97■□□□□ 0.47
Nphp4P59240 AC113060.1-201ENSMUST00000225689 1573 ntBASIC17.97■□□□□ 0.47
Nphp4P59240 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nphp4P59240 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nphp4P59240 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nphp4P59240 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC17.97■□□□□ 0.47
Nphp4P59240 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nphp4P59240 Gm15459-201ENSMUST00000117405 1941 ntBASIC17.97■□□□□ 0.47
Nphp4P59240 Gm8355-201ENSMUST00000177767 1941 ntBASIC17.97■□□□□ 0.47
Nphp4P59240 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Nphp4P59240 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Nphp4P59240 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nphp4P59240 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nphp4P59240 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nphp4P59240 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nphp4P59240 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC17.97■□□□□ 0.47
Nphp4P59240 Gm27243-201ENSMUST00000183964 521 ntBASIC17.97■□□□□ 0.47
Nphp4P59240 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nphp4P59240 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC17.96■□□□□ 0.47
Nphp4P59240 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nphp4P59240 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC17.96■□□□□ 0.47
Nphp4P59240 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nphp4P59240 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nphp4P59240 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nphp4P59240 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Nphp4P59240 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nphp4P59240 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nphp4P59240 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nphp4P59240 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nphp4P59240 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nphp4P59240 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nphp4P59240 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nphp4P59240 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nphp4P59240 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nphp4P59240 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nphp4P59240 Gm25214-201ENSMUST00000104573 129 ntBASIC17.96■□□□□ 0.47
Nphp4P59240 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nphp4P59240 Ighv1-62-201ENSMUST00000193406 350 ntBASIC17.96■□□□□ 0.47
Nphp4P59240 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nphp4P59240 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nphp4P59240 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nphp4P59240 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nphp4P59240 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nphp4P59240 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nphp4P59240 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nphp4P59240 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nphp4P59240 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nphp4P59240 Gm11222-201ENSMUST00000119005 738 ntBASIC17.95■□□□□ 0.46
Nphp4P59240 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC17.95■□□□□ 0.46
Nphp4P59240 AC122371.3-201ENSMUST00000223402 1061 ntBASIC17.95■□□□□ 0.46
Nphp4P59240 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nphp4P59240 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Nphp4P59240 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nphp4P59240 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms