Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tm6sf1P58749 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Tm6sf1P58749 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tm6sf1P58749 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tm6sf1P58749 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tm6sf1P58749 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tm6sf1P58749 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tm6sf1P58749 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tm6sf1P58749 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tm6sf1P58749 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.43■□□□□ 0.22
Tm6sf1P58749 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tm6sf1P58749 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.43■□□□□ 0.22
Tm6sf1P58749 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.43■□□□□ 0.22
Tm6sf1P58749 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tm6sf1P58749 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tm6sf1P58749 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.42■□□□□ 0.22
Tm6sf1P58749 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.42■□□□□ 0.22
Tm6sf1P58749 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tm6sf1P58749 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tm6sf1P58749 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Proscos-202ENSMUST00000178990 666 ntBASIC16.41■□□□□ 0.22
Tm6sf1P58749 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC16.41■□□□□ 0.22
Tm6sf1P58749 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Gm44069-201ENSMUST00000204898 506 ntBASIC16.41■□□□□ 0.22
Tm6sf1P58749 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.41■□□□□ 0.22
Tm6sf1P58749 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.41■□□□□ 0.22
Tm6sf1P58749 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tm6sf1P58749 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tm6sf1P58749 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tm6sf1P58749 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms